Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | LQ777_28230 | Q9CM47 | - | 97224 - 99596 | 87035.2 |
| mbl fold metallo-hydrolase | LQ777_28235 | A8MDP6 | + | 100216 - 101127 | 32963.4 |
| helix-turn-helix transcriptional regulator | LQ777_28240 | P54722 | + | 101128 - 102048 | 35191.9 |
| carboxymuconolactone decarboxylase family protein | LQ777_28245 | P29911 | + | 102091 - 102954 | 31933.9 |
| aldo/keto reductase | LQ777_28250 | Q7XT99 | + | 102961 - 103962 | 36401.7 |
| hypothetical protein | LQ777_28255 | Not Available | + | 104154 - 104321 | 5962.16 |
| type ii toxin-antitoxin system vapc family toxin | LQ777_28260 | Not Available | + | 104318 - 104728 | 15545.1 |
| srpbcc domain-containing protein | LQ777_28265 | Not Available | + | 104983 - 105336 | 13895.5 |
| duf4249 domain-containing protein | LQ777_28270 | Not Available | - | 105519 - 106877 | 50420.3 |
| tonb-dependent receptor | LQ777_28275 | T2KPJ3 | - | 106892 - 109267 | 88771.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.