Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LQ777_27780 | T2KM18 | + | 175906 - 178878 | 107267.0 |
| transporter | LQ777_27785 | Not Available | + | 178949 - 179956 | 36536.9 |
| cation:dicarboxylase symporter family transporter | LQ777_27790 | P96603 | + | 180130 - 181389 | 45051.3 |
| phosphoenolpyruvate carboxykinase (atp) | LQ777_27795 | A5FK68 | + | 181442 - 183046 | 58588.4 |
| class 1 fructose-bisphosphatase | LQ777_27800 | Q5E887 | + | 183182 - 184171 | 35355.2 |
| catalase/peroxidase hpi | LQ777_27805 | B1M869 | - | 184280 - 186577 | 86168.6 |
| arylsulfatase | LQ777_27810 | P50429 | - | 187229 - 188998 | 65774.3 |
| hypothetical protein | LQ777_27815 | Not Available | - | 189311 - 190567 | 47505.9 |
| para family protein | LQ777_27820 | Not Available | + | 385 - 1095 | 26869.4 |
| duf3408 domain-containing protein | LQ777_27825 | Not Available | + | 1099 - 1650 | 20492.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.