Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | LQ777_04910 | Q48460 | - | 1218726 - 1219412 | 26179.1 |
| polysaccharide biosynthesis tyrosine autokinase | LQ777_04915 | P76387 | - | 1219453 - 1221801 | 87446.7 |
| polysaccharide biosynthesis/export family protein | LQ777_04920 | Q45407 | - | 1221834 - 1222661 | 30307.8 |
| hypothetical protein | LQ777_04925 | Not Available | + | 1223251 - 1223925 | 25011.2 |
| hypothetical protein | LQ777_04930 | Not Available | + | 1223938 - 1225557 | 58526.7 |
| dipeptide epimerase | LQ777_04935 | A5FHW9 | + | 1225689 - 1226717 | 38164.9 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | LQ777_04940 | A6UQL9 | + | 1226778 - 1227839 | 38763.5 |
| sugar phosphate isomerase/epimerase | LQ777_04945 | A6THJ4 | - | 1227913 - 1228746 | 30655.9 |
| duf1338 domain-containing protein | LQ777_04950 | Not Available | - | 1228832 - 1229758 | 35049.1 |
| thioesterase | LQ777_04955 | G3ESV1 | - | 1229793 - 1230563 | 29431.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.