Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | LQ777_04760 | Q6LX40 | - | 1186907 - 1188034 | 40378.5 |
| lrp/asnc family transcriptional regulator | LQ777_04765 | P0A2S0 | + | 1188206 - 1188670 | 17675.5 |
| efflux rnd transporter periplasmic adaptor subunit | LQ777_04770 | P13510 | - | 1188741 - 1189958 | 44054.8 |
| tolc family protein | LQ777_04775 | Not Available | - | 1189962 - 1191215 | 47651.2 |
| ytxh domain-containing protein | LQ777_04780 | Not Available | - | 1191564 - 1191935 | 13788.9 |
| ytxh domain-containing protein | LQ777_04785 | Not Available | - | 1191976 - 1192227 | 9078.82 |
| lmo0937 family membrane protein | LQ777_04790 | Not Available | - | 1192614 - 1192775 | 5677.51 |
| response regulator | LQ777_04795 | O78428 | + | 1193162 - 1193617 | 17000.6 |
| sigma-54 dependent transcriptional regulator | LQ777_04800 | P14375 | + | 1193710 - 1195188 | 54766.0 |
| port family protein | LQ777_04805 | Not Available | - | 1195266 - 1195910 | 22486.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.