Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LQ777_04360 | T2KPJ3 | + | 1060696 - 1063896 | 115803.0 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_04365 | T2KNB8 | + | 1063904 - 1065286 | 50486.7 |
| atp-binding protein | LQ777_04370 | Q04850 | - | 1065382 - 1066749 | 49939.9 |
| acyl-acp desaturase | LQ777_04375 | Q9LF04 | - | 1066753 - 1067727 | 37140.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | LQ777_04380 | O35083 | + | 1067896 - 1068651 | 27782.2 |
| sigma-54 dependent transcriptional regulator | LQ777_04385 | Q9APD9 | - | 1068769 - 1070145 | 51390.4 |
| glycosyltransferase family 39 protein | LQ777_04390 | B4TBG8 | + | 1070313 - 1072073 | 66151.9 |
| efflux rnd transporter periplasmic adaptor subunit | LQ777_04395 | Q57500 | + | 1072253 - 1073500 | 46874.0 |
| abc transporter atp-binding protein | LQ777_04400 | Q58903 | + | 1073698 - 1074375 | 25136.2 |
| abc transporter permease | LQ777_04405 | Q8Z824 | + | 1074498 - 1076864 | 87356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.