Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | LQ777_04310 | A0A0K2VM55 | + | 1050467 - 1051747 | 47721.7 |
| nudix hydrolase | LQ777_04315 | I6X235 | + | 1051767 - 1052318 | 20512.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | LQ777_04320 | A5FRC5 | + | 1052432 - 1053610 | 43591.1 |
| prephenate dehydrogenase | LQ777_04325 | P20692 | + | 1053601 - 1054458 | 31046.9 |
| aldo/keto reductase | LQ777_04330 | O94315 | + | 1054604 - 1055467 | 32105.2 |
| hypothetical protein | LQ777_04335 | Not Available | + | 1055555 - 1055899 | 12019.3 |
| pa2169 family four-helix-bundle protein | LQ777_04340 | Not Available | - | 1055976 - 1056431 | 16955.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | LQ777_04345 | Q8A681 | - | 1056570 - 1057877 | 47686.2 |
| duf4290 domain-containing protein | LQ777_04350 | Not Available | - | 1057970 - 1058788 | 31653.6 |
| mate family efflux transporter | LQ777_04355 | Q7WJR0 | + | 1059034 - 1060419 | 49477.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.