Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | LQ777_04060 | O05515 | - | 987021 - 987443 | 16125.2 |
| gfo/idh/moca family oxidoreductase | LQ777_04065 | A1RI61 | - | 987528 - 988814 | 47588.5 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_04070 | T2KNB8 | - | 988926 - 990656 | 64092.2 |
| susc/raga family tonb-linked outer membrane protein | LQ777_04075 | T2KPJ3 | - | 990675 - 992576 | 70936.5 |
| hypothetical protein | LQ777_04080 | Not Available | - | 992779 - 993171 | 14130.6 |
| phospho-sugar mutase | LQ777_04085 | P18159 | - | 993389 - 995146 | 64204.1 |
| d-alanine--d-alanine ligase | LQ777_04090 | Q8PDW3 | - | 995374 - 997026 | 61134.0 |
| nifu family protein | LQ777_04095 | Q93W20 | - | 997218 - 997484 | 9437.56 |
| mrp/nbp35 family atp-binding protein | LQ777_04100 | P53383 | - | 997571 - 998674 | 39516.1 |
| gscfa domain-containing protein | LQ777_04105 | Not Available | - | 998718 - 999752 | 39431.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.