Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | LQ777_03610 | P15005 | + | 865529 - 867124 | 60669.5 |
| galactitol-1-phosphate 5-dehydrogenase | LQ777_03615 | Q06004 | + | 867181 - 868212 | 36561.1 |
| gfo/idh/moca family oxidoreductase | LQ777_03620 | Q9WYP5 | + | 868381 - 869445 | 38918.1 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_03625 | Not Available | - | 869513 - 870817 | 46110.3 |
| susc/raga family tonb-linked outer membrane protein | LQ777_03630 | T2KM18 | - | 870872 - 873997 | 112567.0 |
| dpp iv n-terminal domain-containing protein | LQ777_03635 | Q7MUW6 | + | 874316 - 876550 | 84354.4 |
| lipid a deacylase lpxr family protein | LQ777_03640 | Not Available | + | 876862 - 877899 | 38922.3 |
| tonb-dependent receptor | LQ777_03645 | T2KPJ3 | + | 878111 - 881308 | 116961.0 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_03650 | T2KPM5 | + | 881322 - 882803 | 54520.6 |
| zinc-dependent metalloprotease | LQ777_03655 | Not Available | + | 883192 - 885672 | 91596.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.