Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | LQ777_03110 | D4GP40 | + | 739554 - 740852 | 47407.9 |
| acetylxylan esterase | LQ777_03115 | A0A0K2VM55 | + | 740959 - 742386 | 52696.7 |
| mannonate dehydratase | LQ777_03120 | Q65V66 | + | 742444 - 743649 | 45011.9 |
| alpha-glucuronidase | LQ777_03125 | B3PC73 | + | 743699 - 745855 | 80488.8 |
| gfo/idh/moca family oxidoreductase | LQ777_03130 | O05389 | + | 746032 - 747450 | 52190.1 |
| gfo/idh/moca family oxidoreductase | LQ777_03135 | Not Available | + | 747500 - 748894 | 52191.4 |
| gfo/idh/moca family oxidoreductase | LQ777_03140 | P40332 | + | 748974 - 750152 | 43715.4 |
| sdr family oxidoreductase | LQ777_03145 | Q15SS0 | + | 750198 - 751025 | 29060.8 |
| hypothetical protein | LQ777_03150 | Not Available | + | 751068 - 751838 | 28349.4 |
| fad-dependent oxidoreductase | LQ777_03155 | Not Available | - | 751938 - 754223 | 85004.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.