Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase dimerization domain-containing protein | LQ777_03060 | P76052 | - | 727803 - 729524 | 62961.8 |
| nadp-dependent isocitrate dehydrogenase | LQ777_03065 | P50215 | + | 729714 - 730934 | 45542.2 |
| dabb family protein | LQ777_03070 | Q9LUV2 | + | 731084 - 731491 | 15044.2 |
| ycxb family protein | LQ777_03075 | Not Available | - | 731612 - 732196 | 22565.9 |
| duf4783 domain-containing protein | LQ777_03080 | Not Available | - | 732327 - 732731 | 15355.2 |
| phosphoribosyltransferase | LQ777_03085 | A7Z4G7 | + | 732887 - 733399 | 19093.1 |
| hypothetical protein | LQ777_03090 | Not Available | - | 733458 - 733634 | 6083.73 |
| dead/deah box helicase | LQ777_03095 | P47264 | - | 733728 - 736700 | 114167.0 |
| laci family transcriptional regulator | LQ777_03100 | P46828 | - | 737188 - 738210 | 37177.7 |
| rraa family protein | LQ777_03105 | G2IQQ8 | + | 738583 - 739527 | 35477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.