Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyribose-phosphate aldolase | LQ777_03010 | Q877I0 | - | 711683 - 712324 | 23249.0 |
| pseudouridine synthase | LQ777_03015 | P35159 | - | 712384 - 714243 | 72651.5 |
| acetoacetate--coa ligase | LQ777_03020 | Q5ZLG0 | + | 714488 - 716464 | 73973.3 |
| s41 family peptidase | LQ777_03025 | Q44879 | + | 716713 - 718443 | 64297.4 |
| hypothetical protein | LQ777_03030 | Not Available | - | 718509 - 718955 | 16560.9 |
| signal recognition particle protein | LQ777_03035 | P37105 | - | 719111 - 720430 | 48492.3 |
| hypothetical protein | LQ777_03040 | Not Available | + | 720806 - 721114 | 11321.9 |
| tonb-dependent receptor | LQ777_03045 | T2KPJ3 | + | 721510 - 724791 | 121423.0 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_03050 | T2KN63 | + | 724849 - 726645 | 67572.6 |
| endonuclease/exonuclease/phosphatase family protein | LQ777_03055 | Q5UQW5 | + | 726732 - 727574 | 31851.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.