Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | LQ777_27530 | Q2KIM0 | + | 101825 - 103483 | 61988.9 |
| glycoside hydrolase 43 family protein | LQ777_27535 | T2KN85 | + | 103620 - 105209 | 59820.4 |
| tonb-dependent receptor | LQ777_27540 | Q9Z3Q5 | + | 105621 - 107969 | 84609.3 |
| hypothetical protein | LQ777_27545 | Not Available | - | 108477 - 108638 | 6217.66 |
| beta-lactamase family protein | LQ777_27550 | Not Available | - | 108648 - 108905 | 9764.47 |
| glycoside hydrolase 43 family protein | LQ777_27555 | T2KN85 | - | 109705 - 111327 | 61022.0 |
| tagaturonate reductase | LQ777_27560 | Q9KFI7 | - | 111499 - 113025 | 56289.2 |
| glycoside hydrolase family 95 protein | LQ777_27565 | Q8L7W8 | - | 113161 - 115635 | 91698.9 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_27570 | T2KN63 | - | 115769 - 117310 | 56820.9 |
| tonb-dependent receptor | LQ777_27575 | T2KPJ3 | - | 117324 - 120473 | 114988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.