Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding dehydrogenase | LQ777_26325 | Q8KQL2 | - | 11345 - 12415 | 38688.8 |
| spw repeat protein | LQ777_26330 | Not Available | - | 12485 - 12886 | 14574.5 |
| sdr family oxidoreductase | LQ777_26335 | Q6GDV6 | - | 12891 - 13658 | 27365.7 |
| cytochrome c | LQ777_26340 | P0A388 | + | 14337 - 15317 | 34995.1 |
| glycoside hydrolase family 15 protein | LQ777_26345 | Q978S7 | + | 15446 - 17194 | 65608.4 |
| endonuclease/exonuclease/phosphatase family protein | LQ777_26350 | Not Available | - | 17261 - 18460 | 45253.8 |
| hypothetical protein | LQ777_26355 | Not Available | - | 18508 - 19458 | 35435.4 |
| hamp domain-containing histidine kinase | LQ777_26360 | Q8CSL7 | - | 19536 - 20918 | 52009.7 |
| response regulator transcription factor | LQ777_26365 | P0AD00 | - | 20918 - 21598 | 25542.3 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | LQ777_26370 | G4RK44 | - | 21800 - 24019 | 83952.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.