Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cap domain-containing protein | LQ777_26220 | Not Available | + | 223255 - 223941 | 26828.6 |
| substrate-binding domain-containing protein | LQ777_26225 | Q9K6K2 | + | 224549 - 225532 | 37702.3 |
| thua domain-containing protein | LQ777_26230 | Not Available | - | 225794 - 226705 | 33677.4 |
| glycoside hydrolase family 140 protein | LQ777_26235 | Not Available | - | 226791 - 228179 | 52313.1 |
| sugar phosphate isomerase/epimerase | LQ777_26240 | Not Available | - | 228206 - 229123 | 33991.6 |
| phytanoyl-coa dioxygenase family protein | LQ777_26245 | Q2TDY4 | - | 229143 - 230036 | 33888.2 |
| gfo/idh/moca family oxidoreductase | LQ777_26250 | P74041 | - | 230164 - 231324 | 43443.7 |
| sugar phosphate isomerase/epimerase | LQ777_26255 | Q63B72 | - | 231327 - 232184 | 32248.2 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_26260 | T2KN63 | - | 232272 - 233963 | 63008.5 |
| tonb-dependent receptor | LQ777_26265 | T2KPJ3 | - | 233988 - 237179 | 116769.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.