Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase | LQ777_25870 | P44550 | + | 134053 - 135132 | 39709.6 |
| acyltransferase | LQ777_25875 | Q9X3P3 | - | 135158 - 136147 | 37402.5 |
| helix-turn-helix transcriptional regulator | LQ777_25880 | O31494 | - | 136445 - 136738 | 10914.6 |
| dsba family protein | LQ777_25885 | Q9K8Z7 | + | 137166 - 138068 | 34051.7 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | LQ777_25890 | Not Available | - | 138492 - 139883 | 51178.7 |
| susc/raga family tonb-linked outer membrane protein | LQ777_25895 | T2KM18 | - | 139903 - 142932 | 109665.0 |
| arac family transcriptional regulator | LQ777_25900 | P77396 | - | 143381 - 144256 | 33850.2 |
| dihydrodipicolinate synthase family protein | LQ777_25905 | B1YJ39 | + | 144403 - 145326 | 33600.8 |
| 4-hydroxyproline epimerase | LQ777_25910 | D2QN44 | + | 145369 - 146373 | 36726.9 |
| fad-dependent oxidoreductase | LQ777_25915 | Q0BUV2 | + | 146454 - 147698 | 45245.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.