Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LQ777_25470 | Not Available | - | 18035 - 20602 | 91936.7 |
| lyttr family dna-binding domain-containing protein | LQ777_25475 | Q8D4U6 | - | 20718 - 21476 | 28834.7 |
| histidine kinase | LQ777_25480 | Q8E7H4 | - | 21473 - 22582 | 43016.7 |
| hypothetical protein | LQ777_25485 | Not Available | - | 22772 - 23125 | 12775.4 |
| nadp-dependent oxidoreductase | LQ777_25490 | Q0MVN8 | + | 23504 - 24478 | 34910.8 |
| helix-turn-helix transcriptional regulator | LQ777_25495 | P54722 | + | 24483 - 25403 | 35419.2 |
| hypothetical protein | LQ777_25500 | Not Available | - | 25599 - 25778 | 6798.92 |
| hypothetical protein | LQ777_25505 | Q8XTY1 | - | 25783 - 26703 | 34442.6 |
| pas domain s-box protein | LQ777_25510 | Q869S5 | + | 26994 - 30917 | 148122.0 |
| response regulator | LQ777_25515 | P51586 | + | 30914 - 31336 | 15243.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.