Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | LQ777_25315 | Q797A7 | + | 304679 - 305980 | 46395.9 |
| llm class flavin-dependent oxidoreductase | LQ777_25320 | Q4ZRE3 | + | 306012 - 307142 | 41960.2 |
| sigma-70 family rna polymerase sigma factor | LQ777_25325 | Not Available | + | 307310 - 307882 | 22520.0 |
| fecr domain-containing protein | LQ777_25330 | Not Available | + | 307938 - 309041 | 42153.9 |
| susc/raga family tonb-linked outer membrane protein | LQ777_25335 | T2KPJ3 | + | 309275 - 312544 | 119357.0 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_25340 | Q8A1G2 | + | 312567 - 314294 | 64946.0 |
| lyttr family dna-binding domain-containing protein | LQ777_25345 | Q9KL96 | - | 314423 - 315148 | 27715.3 |
| tetratricopeptide repeat-containing sensor histidine kinase | LQ777_25350 | Q9HV31 | - | 315259 - 317334 | 78726.1 |
| coce/nond family hydrolase | LQ777_25355 | Q9L9D7 | + | 317939 - 319864 | 73197.6 |
| hypothetical protein | LQ777_25360 | Not Available | - | 319950 - 320540 | 22653.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.