Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gh92 family glycosyl hydrolase | LQ777_25065 | O86365 | - | 234899 - 237259 | 87085.9 |
| glycoside hydrolase family 76 protein | LQ777_25070 | Q9P6I4 | - | 237263 - 238477 | 45175.0 |
| suse domain-containing protein | LQ777_25075 | Not Available | - | 238560 - 239678 | 40337.6 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_25080 | T2KNB8 | - | 239699 - 241330 | 60496.3 |
| tonb-dependent receptor | LQ777_25085 | T2KPJ3 | - | 241351 - 244473 | 114200.0 |
| sugar porter family mfs transporter | LQ777_25090 | P96710 | - | 244543 - 245970 | 51592.5 |
| gntr family transcriptional regulator | LQ777_25095 | O34817 | - | 246150 - 246821 | 25527.7 |
| fasciclin domain-containing protein | LQ777_25100 | P74615 | + | 247525 - 248088 | 20056.4 |
| duf2254 domain-containing protein | LQ777_25105 | P9WM34 | + | 248225 - 249556 | 49807.3 |
| hypothetical protein | LQ777_25110 | Not Available | + | 250122 - 250553 | 16351.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.