Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | LQ777_24865 | Not Available | - | 180038 - 181240 | 45791.2 |
| duf4374 domain-containing protein | LQ777_24870 | Not Available | - | 181418 - 182641 | 43970.3 |
| tonb-dependent receptor plug domain-containing protein | LQ777_24875 | Q8DD41 | - | 182661 - 185087 | 89917.9 |
| hypothetical protein | LQ777_24880 | Not Available | - | 185179 - 185874 | 25854.5 |
| rna polymerase sigma-70 factor | LQ777_24885 | Q7U1Z6 | - | 185975 - 186499 | 20750.6 |
| helix-turn-helix transcriptional regulator | LQ777_24890 | O34533 | - | 186940 - 187296 | 13445.5 |
| sdr family oxidoreductase | LQ777_24895 | A0A2U8U2K8 | + | 187399 - 188142 | 25750.6 |
| family 43 glycosylhydrolase | LQ777_24900 | Q93HT9 | - | 188327 - 189769 | 51929.8 |
| acetylxylan esterase | LQ777_24905 | Not Available | - | 189810 - 190568 | 27976.9 |
| hypothetical protein | LQ777_24910 | Not Available | + | 190952 - 191389 | 17172.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.