Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | LQ777_24365 | P54663 | - | 65169 - 66647 | 55588.4 |
| nitrite reductase small subunit nird | LQ777_24370 | P0A230 | - | 66720 - 67073 | 13131.6 |
| nitrite reductase large subunit nirb | LQ777_24375 | P08201 | - | 67183 - 69717 | 92185.8 |
| uroporphyrinogen-iii c-methyltransferase | LQ777_24380 | Q58375 | + | 69996 - 70754 | 26686.2 |
| alginate export family protein | LQ777_24385 | Not Available | + | 71026 - 72549 | 55880.4 |
| nark family nitrate/nitrite mfs transporter | LQ777_24390 | Q9LPV5 | + | 72639 - 73955 | 46914.6 |
| molybdopterin-dependent oxidoreductase | LQ777_24395 | P39458 | + | 74013 - 77531 | 129465.0 |
| rubredoxin | LQ777_24400 | P48344 | + | 77575 - 79032 | 56510.1 |
| acyltransferase | LQ777_24405 | P29113 | - | 79127 - 80215 | 41038.6 |
| lipid ii flippase amj family protein | LQ777_24410 | P96581 | - | 80722 - 81522 | 29337.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.