Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent cysteine synthase family protein | LQ777_24265 | Q5HRP1 | - | 36018 - 37082 | 38679.5 |
| ahpc/tsa family protein | LQ777_24270 | Q63DQ8 | - | 37201 - 38334 | 41845.2 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_24275 | T2KPM5 | - | 38359 - 39714 | 49219.2 |
| susc/raga family tonb-linked outer membrane protein | LQ777_24280 | T2KPJ3 | - | 39728 - 43039 | 119955.0 |
| fecr domain-containing protein | LQ777_24285 | Not Available | - | 43234 - 44352 | 41381.6 |
| sigma-70 family rna polymerase sigma factor | LQ777_24290 | Q44583 | - | 44441 - 45007 | 22677.2 |
| arac family transcriptional regulator | LQ777_24295 | Q5HJR8 | - | 45273 - 46139 | 33341.7 |
| sodium:solute symporter | LQ777_24300 | Q5E733 | + | 46600 - 48198 | 58447.3 |
| dihydrodipicolinate synthase family protein | LQ777_24305 | A4SX51 | + | 48235 - 49185 | 34722.7 |
| tonb-dependent receptor | LQ777_24310 | T2KPJ3 | + | 49754 - 52801 | 111614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.