Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | LQ777_24110 | D3V7P2 | - | 5708779 - 5709909 | 40738.8 |
| tolc family protein | LQ777_24115 | Q9K2Y1 | - | 5709958 - 5711343 | 51900.7 |
| tetr/acrr family transcriptional regulator | LQ777_24120 | O32228 | - | 5711297 - 5711944 | 25480.7 |
| response regulator transcription factor | LQ777_24130 | Q44006 | + | 1519 - 2190 | 25294.7 |
| atp-binding protein | LQ777_24135 | Q2FH24 | + | 2259 - 3614 | 50820.4 |
| hypothetical protein | LQ777_24140 | Not Available | + | 4050 - 4343 | 11044.0 |
| efflux rnd transporter periplasmic adaptor subunit | LQ777_24145 | Q8G2M7 | + | 4397 - 5479 | 40850.2 |
| efflux rnd transporter permease subunit | LQ777_24150 | Q8G2M6 | + | 5506 - 8709 | 117437.0 |
| tolc family protein | LQ777_24155 | O31101 | + | 8702 - 10135 | 53602.2 |
| tyrosine-type recombinase/integrase | LQ777_24160 | O50655 | - | 10226 - 11227 | 38072.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.