Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| t9ss type a sorting domain-containing protein | LQ777_23910 | Not Available | - | 5659330 - 5662005 | 97368.0 |
| peptide-methionine (r)-s-oxide reductase msrb | LQ777_23915 | Q8DJK9 | - | 5662223 - 5662630 | 15453.3 |
| recq family atp-dependent dna helicase | LQ777_23920 | P15043 | + | 5662788 - 5664713 | 72998.9 |
| duf2141 domain-containing protein | LQ777_23925 | Not Available | + | 5664884 - 5665339 | 16473.8 |
| sdr family oxidoreductase | LQ777_23930 | O07575 | + | 5665504 - 5666370 | 31082.9 |
| gluconate 2-dehydrogenase subunit 3 family protein | LQ777_23935 | O34213 | + | 5666429 - 5667031 | 22867.8 |
| gmc family oxidoreductase | LQ777_23940 | Q3YAT3 | + | 5667094 - 5668632 | 55660.9 |
| family 1 glycosylhydrolase | LQ777_23945 | P24240 | + | 5668714 - 5670054 | 51000.0 |
| alpha/beta hydrolase | LQ777_23950 | Q988D4 | + | 5670100 - 5670873 | 27925.5 |
| Trna-pro | Not Available | Not Available | + | 5670913 - 5671005 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.