Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | LQ777_23660 | B3ETU4 | + | 5596635 - 5597660 | 37549.0 |
| rok family protein | LQ777_23665 | Q9X1I0 | - | 5597720 - 5598634 | 32708.1 |
| sdr family oxidoreductase | LQ777_23670 | Q8KES3 | - | 5598775 - 5599449 | 23850.8 |
| abc transporter permease | LQ777_23675 | Q1RGU3 | + | 5599592 - 5600323 | 25719.9 |
| atp-binding cassette domain-containing protein | LQ777_23680 | P30769 | + | 5600336 - 5601082 | 27721.6 |
| carboxylating nicotinate-nucleotide diphosphorylase | LQ777_23685 | B2RFS9 | - | 5601148 - 5601981 | 30168.3 |
| hypothetical protein | LQ777_23690 | Not Available | + | 5602297 - 5602683 | 13815.9 |
| protein translocase subunit secdf | LQ777_23695 | D0MIN4 | + | 5602826 - 5605897 | 110472.0 |
| amino acid permease | LQ777_23700 | O07576 | + | 5606041 - 5607537 | 54117.3 |
| sulfite exporter taue/safe family protein | LQ777_23705 | Q9PFB4 | + | 5607643 - 5608446 | 28564.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.