Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | LQ777_23360 | P42480 | - | 5531302 - 5532489 | 43336.4 |
| Trna-thr | Not Available | Not Available | + | 5532642 - 5532716 | Not Available |
| Trna-gly | Not Available | Not Available | + | 5532776 - 5532851 | Not Available |
| Trna-tyr | Not Available | Not Available | + | 5532953 - 5533038 | Not Available |
| hypothetical protein | LQ777_23380 | Not Available | - | 5533236 - 5533781 | 20067.1 |
| m13 family metallopeptidase | LQ777_23385 | Q8IS64 | - | 5533912 - 5535987 | 78353.9 |
| duf255 domain-containing protein | LQ777_23390 | Q09214 | - | 5536196 - 5536783 | 22474.1 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | LQ777_23395 | Q1IDB9 | - | 5536875 - 5537546 | 25237.2 |
| duf4293 domain-containing protein | LQ777_23400 | Not Available | + | 5537599 - 5538072 | 17467.6 |
| phosphatase pap2 family protein | LQ777_23405 | Q57819 | - | 5538156 - 5538809 | 25084.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.