Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhomboid family intramembrane serine protease | LQ777_22860 | O14364 | - | 5428674 - 5429453 | 29795.3 |
| dna mismatch repair endonuclease mutl | LQ777_22865 | Q11Z58 | - | 5429492 - 5431474 | 73515.5 |
| dihydrolipoyl dehydrogenase | LQ777_22870 | O05940 | - | 5431668 - 5433068 | 49703.8 |
| peptide chain release factor 2 | LQ777_22875 | A0KNK6 | + | 5433360 - 5434437 | 40739.5 |
| gdsl-type esterase/lipase family protein | LQ777_22880 | Not Available | + | 5434561 - 5435271 | 25968.5 |
| duf2306 domain-containing protein | LQ777_22885 | Not Available | - | 5435274 - 5435972 | 26249.1 |
| lyttr family transcriptional regulator | LQ777_22890 | Not Available | - | 5436107 - 5437024 | 34449.4 |
| rhomboid family intramembrane serine protease | LQ777_22895 | O14364 | - | 5437044 - 5437667 | 23286.7 |
| polyprenyl synthetase family protein | LQ777_22900 | Q8PW34 | - | 5437736 - 5438707 | 36587.9 |
| hypothetical protein | LQ777_22905 | Not Available | - | 5438769 - 5439596 | 31242.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.