Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | LQ777_02060 | P42401 | + | 500170 - 500865 | 25567.3 |
| m20 family metallopeptidase | LQ777_02065 | O07598 | + | 500933 - 502135 | 43458.2 |
| gluconate 2-dehydrogenase subunit 3 family protein | LQ777_02070 | Not Available | + | 502289 - 502927 | 23110.8 |
| gmc family oxidoreductase | LQ777_02075 | M1VMF7 | + | 503034 - 504752 | 63981.0 |
| hypothetical protein | LQ777_02080 | Not Available | + | 505031 - 505597 | 18381.8 |
| atp-binding cassette domain-containing protein | LQ777_02085 | P31060 | + | 505732 - 507063 | 49041.1 |
| gliding motility-associated c-terminal domain-containing protein | LQ777_02090 | Not Available | + | 507645 - 509471 | 63875.6 |
| ompa family protein | LQ777_02095 | Q7NFT5 | + | 509551 - 511995 | 90433.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | LQ777_02100 | Q11VT3 | + | 512074 - 512880 | 29654.6 |
| cytochrome c oxidase subunit 3 | LQ777_02105 | P98005 | + | 512962 - 513570 | 23083.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.