Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | LQ777_01860 | Q9X5T6 | - | 449247 - 450488 | 46076.6 |
| gfo/idh/moca family oxidoreductase | LQ777_01865 | P40332 | - | 450454 - 451911 | 54359.4 |
| sugar phosphate isomerase/epimerase | LQ777_01870 | Not Available | + | 452304 - 453236 | 34862.9 |
| abc transporter permease | LQ777_01875 | Not Available | - | 453244 - 453771 | 19688.9 |
| glycoside hydrolase family 125 protein | LQ777_01880 | Q10449 | - | 453960 - 455393 | 54253.4 |
| nudix hydrolase | LQ777_01885 | Q58549 | + | 455652 - 456353 | 27069.5 |
| ribulokinase | LQ777_01890 | P58543 | + | 456550 - 458235 | 60750.8 |
| l-arabinose isomerase | LQ777_01895 | A5FKW3 | + | 458213 - 459703 | 55024.2 |
| alpha-n-arabinofuranosidase | LQ777_01900 | Q59219 | + | 459768 - 461309 | 56852.9 |
| l-ribulose-5-phosphate 4-epimerase | LQ777_01905 | Q5PJ61 | + | 461433 - 462131 | 26068.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.