Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LQ777_08960 | Not Available | - | 2206142 - 2206888 | 27680.9 |
| sigma-70 family rna polymerase sigma factor | LQ777_08965 | Not Available | - | 2206888 - 2207550 | 25411.7 |
| lytic transglycosylase domain-containing protein | LQ777_08970 | P0AEZ8 | - | 2207800 - 2208657 | 32017.5 |
| dihydroxy-acid dehydratase | LQ777_08975 | Q92RP0 | + | 2208941 - 2210647 | 61317.9 |
| sdr family oxidoreductase | LQ777_08980 | Q48436 | + | 2210680 - 2211447 | 26944.4 |
| eama family transporter | LQ777_08985 | P0AA72 | - | 2211474 - 2212394 | 32702.2 |
| leucine-rich repeat domain-containing protein | LQ777_08990 | Q6UXM1 | - | 2212513 - 2213940 | 54528.2 |
| insulinase family protein | LQ777_08995 | O25656 | - | 2214037 - 2216895 | 106829.0 |
| lipid a deacylase lpxr family protein | LQ777_09000 | Not Available | - | 2217068 - 2218045 | 37658.5 |
| csbd family protein | LQ777_09005 | P68207 | - | 2218176 - 2218361 | 6965.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.