Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sphingomyelin synthase family protein | LQ777_08560 | Not Available | + | 2117176 - 2117862 | 26090.5 |
| bama/tama family outer membrane protein | LQ777_08565 | Not Available | - | 2117841 - 2118821 | 37382.4 |
| phytanoyl-coa dioxygenase family protein | LQ777_08570 | Q7WHJ0 | + | 2119158 - 2119973 | 31315.8 |
| sdr family oxidoreductase | LQ777_08575 | P54554 | + | 2120097 - 2120870 | 27905.0 |
| dead/deah box helicase | LQ777_08580 | P25888 | + | 2121120 - 2122478 | 49610.3 |
| tonb-dependent receptor | LQ777_08585 | Q9HUX3 | + | 2122749 - 2125223 | 90926.5 |
| pepsy domain-containing protein | LQ777_08590 | Not Available | + | 2125260 - 2126468 | 44989.9 |
| pqq-binding-like beta-propeller repeat protein | LQ777_08595 | Q59086 | + | 2126547 - 2128682 | 77737.5 |
| alpha/beta hydrolase | LQ777_08600 | Q9WYH1 | + | 2128825 - 2129808 | 35616.5 |
| hypothetical protein | LQ777_08605 | Not Available | - | 2129845 - 2130486 | 24834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.