Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucosylceramidase | LQ777_08410 | Q4WBR2 | - | 2083079 - 2084506 | 52125.0 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_08415 | T2KN63 | - | 2084614 - 2086077 | 54110.7 |
| tonb-dependent receptor | LQ777_08420 | T2KPJ3 | - | 2086164 - 2089583 | 124844.0 |
| fecr family protein | LQ777_08425 | Not Available | - | 2089841 - 2090956 | 42062.2 |
| sigma-70 family rna polymerase sigma factor | LQ777_08430 | O07582 | - | 2091209 - 2091802 | 23476.0 |
| gamma-glutamyltransferase | LQ777_08435 | O05218 | - | 2092059 - 2093804 | 63477.9 |
| sugar phosphate isomerase/epimerase | LQ777_08440 | A6M225 | - | 2093881 - 2094738 | 31779.2 |
| glycine c-acetyltransferase | LQ777_08445 | P0AB78 | - | 2094890 - 2096086 | 43392.0 |
| nad-dependent epimerase/dehydratase family protein | LQ777_08450 | Q4L3L8 | - | 2096092 - 2097054 | 35912.8 |
| lrp/asnc family transcriptional regulator | LQ777_08455 | P42179 | + | 2097273 - 2097737 | 17836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.