Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starvation-sensing protein rspa | LQ777_08210 | D4GJ14 | - | 2027746 - 2029101 | 49807.7 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | LQ777_08215 | Not Available | - | 2029272 - 2030813 | 56780.0 |
| susc/raga family tonb-linked outer membrane protein | LQ777_08220 | T2KMI3 | - | 2030889 - 2034029 | 114276.0 |
| mandelate racemase/muconate lactonizing enzyme family protein | LQ777_08225 | D7BPX0 | - | 2034287 - 2035528 | 45785.9 |
| laci family transcriptional regulator | LQ777_08230 | Q6LQB9 | - | 2035585 - 2036625 | 38773.6 |
| hypothetical protein | LQ777_08235 | Not Available | - | 2036882 - 2038582 | 63784.4 |
| monofunctional biosynthetic peptidoglycan transglycosylase | LQ777_08240 | Q4K4C2 | + | 2038916 - 2039752 | 32201.6 |
| sugar kinase | LQ777_08245 | D9TT10 | - | 2039768 - 2040706 | 33706.8 |
| mfs transporter | LQ777_08250 | A2X6E6 | - | 2040787 - 2042163 | 50702.1 |
| bama/tama family outer membrane protein | LQ777_08255 | Not Available | + | 2042281 - 2043714 | 54970.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.