Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4,5-dopa dioxygenase extradiol | LQ777_08110 | P24197 | + | 2001210 - 2002091 | 32514.0 |
| marr family transcriptional regulator | LQ777_08115 | P97247 | + | 2002438 - 2002875 | 17190.7 |
| tolc family protein | LQ777_08120 | Q8G0Y6 | + | 2002872 - 2004194 | 47962.9 |
| hlyd family secretion protein | LQ777_08125 | P0DPR6 | + | 2004215 - 2005324 | 39588.9 |
| dha2 family efflux mfs transporter permease subunit | LQ777_08130 | P0AEJ1 | + | 2005439 - 2006995 | 55884.7 |
| duf3667 domain-containing protein | LQ777_08135 | Not Available | - | 2007175 - 2007858 | 25954.3 |
| hypothetical protein | LQ777_08140 | Not Available | - | 2008030 - 2008683 | 24341.3 |
| lyttr family transcriptional regulator | LQ777_08145 | Q5HLG2 | + | 2008842 - 2009594 | 29159.0 |
| malate:quinone oxidoreductase | LQ777_08150 | A5FGX2 | - | 2009727 - 2011256 | 56679.0 |
| heparinase ii/iii-family protein | LQ777_08155 | Not Available | - | 2011763 - 2013718 | 74015.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.