Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pig-l family deacetylase | LQ777_08060 | Q81AU5 | + | 1990458 - 1991219 | 28811.4 |
| nodulation s family protein | LQ777_08065 | Q53514 | + | 1991264 - 1991845 | 22060.2 |
| glycosyltransferase family 2 protein | LQ777_08070 | D4GYG7 | - | 1991888 - 1993054 | 44271.8 |
| phosphatase pap2 family protein | LQ777_08075 | Q8A6M3 | - | 1993195 - 1993770 | 21333.3 |
| sugar phosphate isomerase/epimerase | LQ777_08080 | P54724 | - | 1993838 - 1994752 | 34684.6 |
| helix-turn-helix transcriptional regulator | LQ777_08085 | Q51373 | - | 1994874 - 1995116 | 8982.99 |
| hypothetical protein | LQ777_08090 | Not Available | - | 1995433 - 1995627 | 6662.7 |
| dienelactone hydrolase family protein | LQ777_08095 | Q8X8L4 | - | 1995767 - 1996624 | 31284.4 |
| class ii fumarate hydratase | LQ777_08100 | Q9CMK1 | + | 1996906 - 1998306 | 50601.6 |
| glycoside hydrolase family 3 protein | LQ777_08105 | Q46684 | - | 1998414 - 2000753 | 83996.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.