Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr family dna-binding transcription regulator | LQ777_08010 | D4GYE7 | - | 1977134 - 1977886 | 27857.6 |
| gdp-mannose pyrophosphatase nudk | LQ777_08015 | A8GHJ1 | + | 1977932 - 1978543 | 23104.4 |
| duf4406 domain-containing protein | LQ777_08020 | Not Available | + | 1978545 - 1978892 | 12729.5 |
| transposase | LQ777_08025 | Not Available | + | 1979048 - 1979584 | 21814.2 |
| pig-l family deacetylase | LQ777_08030 | Not Available | - | 1979676 - 1982210 | 92660.8 |
| family 20 glycosylhydrolase | LQ777_08035 | P49008 | + | 1982434 - 1984314 | 70220.0 |
| sodium-translocating pyrophosphatase | LQ777_08040 | Q8TJA9 | + | 1984763 - 1987444 | 94056.4 |
| 50s ribosomal protein l25/general stress protein ctc | LQ777_08045 | Q11RT6 | - | 1987545 - 1988114 | 20537.0 |
| ribose-phosphate pyrophosphokinase | LQ777_08050 | Q7MT83 | - | 1988170 - 1989111 | 34171.2 |
| acyl-coa dehydrogenase | LQ777_08055 | B2CML6 | + | 1989317 - 1990474 | 43058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.