Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chat domain-containing protein | LQ777_07660 | Not Available | + | 1886405 - 1889008 | 97987.4 |
| 3'-5' exonuclease | LQ777_07665 | O67074 | - | 1889015 - 1889635 | 23623.2 |
| s1-like domain-containing rna-binding protein | LQ777_07670 | O06747 | + | 1889906 - 1890748 | 31503.8 |
| fusc family protein | LQ777_07675 | P75870 | - | 1890759 - 1892906 | 80005.0 |
| abc transporter atp-binding protein/permease | LQ777_07680 | P45861 | - | 1892899 - 1894659 | 65128.6 |
| ribose 5-phosphate isomerase b | LQ777_07685 | P39156 | - | 1894671 - 1895102 | 15649.7 |
| glucose-6-phosphate dehydrogenase | LQ777_07690 | P73411 | + | 1895245 - 1896738 | 55983.6 |
| 6-phosphogluconolactonase | LQ777_07695 | P74618 | + | 1896838 - 1897563 | 27092.3 |
| tryptophan--trna ligase | LQ777_07700 | Q8RGA3 | - | 1897812 - 1898792 | 36909.9 |
| nadp-dependent malic enzyme | LQ777_07705 | P43837 | - | 1898889 - 1901156 | 82636.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.