Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m1 family metallopeptidase | LQ777_07260 | Q97AJ6 | - | 1789626 - 1791266 | 62779.2 |
| s9 family peptidase | LQ777_07265 | Q6F3I7 | - | 1791277 - 1793364 | 77976.7 |
| heavy metal-binding domain-containing protein | LQ777_07270 | A6L2T0 | - | 1793566 - 1793886 | 11095.5 |
| prolyl oligopeptidase family serine peptidase | LQ777_07275 | D4AR77 | - | 1794017 - 1796554 | 92557.7 |
| alpha-l-fucosidase | LQ777_07280 | Q9BTY2 | - | 1796837 - 1798183 | 50529.1 |
| lipocalin family protein | LQ777_07285 | Not Available | + | 1798370 - 1798903 | 19197.5 |
| duf4918 family protein | LQ777_07290 | Not Available | - | 1798965 - 1799645 | 26001.0 |
| smp-30/gluconolactonase/lre family protein | LQ777_07295 | Q01578 | + | 1799768 - 1800643 | 32292.3 |
| fad/nad(p)-binding protein | LQ777_07300 | Not Available | + | 1800723 - 1802258 | 57398.4 |
| aec family transporter | LQ777_07305 | Q58437 | + | 1802230 - 1803153 | 33156.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.