Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | LQ777_05960 | O34598 | + | 1482081 - 1482587 | 18864.1 |
| degt/dnrj/eryc1/strs family aminotransferase | LQ777_05965 | Q8EEB1 | + | 1482782 - 1483987 | 43369.8 |
| iron-containing alcohol dehydrogenase family protein | LQ777_05970 | Q8EEB0 | + | 1484013 - 1485116 | 41022.0 |
| 3-deoxy-8-phosphooctulonate synthase | LQ777_05975 | B3E467 | + | 1485218 - 1486069 | 31469.1 |
| phosphatase | LQ777_05980 | P0ABZ5 | + | 1486159 - 1486866 | 26468.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | LQ777_05985 | Q11R71 | + | 1486946 - 1487701 | 28051.3 |
| thiamine diphosphokinase | LQ777_05990 | O34664 | + | 1487730 - 1488392 | 24800.6 |
| acyltransferase | LQ777_05995 | P21542 | - | 1488373 - 1489494 | 42432.0 |
| c25 family cysteine peptidase | LQ777_06000 | Not Available | - | 1489491 - 1492499 | 111797.0 |
| padr family transcriptional regulator | LQ777_06005 | C0H3Y4 | + | 1492778 - 1493179 | 14776.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.