Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | LQ777_05560 | B5F3F4 | - | 1375010 - 1376335 | 49743.6 |
| duf1080 domain-containing protein | LQ777_05565 | Not Available | - | 1376430 - 1377173 | 27743.8 |
| sugar phosphate isomerase/epimerase | LQ777_05570 | B3W8L5 | - | 1377236 - 1378177 | 34559.5 |
| ragb/susd family nutrient uptake outer membrane protein | LQ777_05575 | A7LXT5 | - | 1378341 - 1380050 | 63581.1 |
| tonb-dependent receptor | LQ777_05580 | T2KPJ3 | - | 1380130 - 1383297 | 115576.0 |
| fecr domain-containing protein | LQ777_05585 | Not Available | - | 1383359 - 1384162 | 30025.4 |
| hypothetical protein | LQ777_05590 | Not Available | + | 1384583 - 1385335 | 28898.4 |
| rok family protein | LQ777_05595 | P94490 | + | 1385448 - 1386653 | 43899.1 |
| age family epimerase/isomerase | LQ777_05600 | P82343 | + | 1386946 - 1388139 | 46131.9 |
| sugar mfs transporter | LQ777_05605 | Q2YIJ8 | + | 1388145 - 1389401 | 44672.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.