Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | LQ777_05460 | G4RK44 | - | 1347150 - 1349384 | 85177.6 |
| arginine deiminase family protein | LQ777_05465 | P41142 | + | 1349653 - 1351110 | 55302.7 |
| arginine deiminase-related protein | LQ777_05470 | Not Available | + | 1351243 - 1352142 | 33631.1 |
| gfo/idh/moca family oxidoreductase | LQ777_05475 | P77503 | - | 1352212 - 1353243 | 36939.5 |
| marr family transcriptional regulator | LQ777_05480 | Q2G0B1 | + | 1353384 - 1353845 | 16781.0 |
| hypothetical protein | LQ777_05485 | Not Available | + | 1353900 - 1354109 | 7654.29 |
| duf2807 domain-containing protein | LQ777_05490 | Not Available | + | 1354383 - 1355105 | 25325.2 |
| sdr family oxidoreductase | LQ777_05495 | Q8BYK4 | + | 1355185 - 1356033 | 30793.7 |
| port family protein | LQ777_05500 | Not Available | - | 1356165 - 1357001 | 29849.3 |
| sdr family oxidoreductase | LQ777_05505 | Q071N0 | + | 1357226 - 1357939 | 25581.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.