Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Spirosoma
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Spirosoma |
| Species | Spirosoma oryzicola |
| Strain | RHs26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spirosoma oryzicola RHs26
Accession NumberCP089538.1
Gene Summary
Adenine Count
1431302 bp
Thymine Count
1434028 bp
Guanine Count
1425264 bp
Cytosine Count
1422474 bp
Genome Length
5713068 bp
Protein-coding Genes
4767 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | LQ777_04960 | Q2FH24 | - | 1230612 - 1232021 | 53262.1 |
| response regulator transcription factor | LQ777_04965 | Q44006 | - | 1232098 - 1232775 | 25546.1 |
| hypothetical protein | LQ777_04970 | Not Available | + | 1233315 - 1233491 | 6489.78 |
| four-helix bundle copper-binding protein | LQ777_04975 | Not Available | + | 1233527 - 1233943 | 15828.8 |
| pyridoxamine 5'-phosphate oxidase family protein | LQ777_04980 | Q01358 | + | 1234038 - 1234541 | 18934.3 |
| duf3891 family protein | LQ777_04985 | Not Available | + | 1234633 - 1235364 | 28120.3 |
| glycogen debranching protein glgx | LQ777_04990 | P0A4Y5 | - | 1235415 - 1237529 | 79479.4 |
| pa2169 family four-helix-bundle protein | LQ777_04995 | Not Available | - | 1237782 - 1238237 | 17042.8 |
| duf3140 domain-containing protein | LQ777_05000 | Not Available | - | 1238378 - 1238731 | 13310.3 |
| duf2945 domain-containing protein | LQ777_05005 | Not Available | - | 1238739 - 1238951 | 7613.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.