Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional repressor deor | O1Q98_00545 | P0ACK7 | - | 122111 - 122890 | 27985.7 |
| aspartate:alanine antiporter | O1Q98_00550 | C6DEP2 | - | 123399 - 125087 | 60668.4 |
| inner membrane protein ybjm | O1Q98_00555 | P64440 | + | 125456 - 125827 | 14084.8 |
| grxa family glutaredoxin | O1Q98_00560 | P0A1P9 | - | 125916 - 126170 | 9566.37 |
| oxygen-insensitive nadph nitroreductase | O1Q98_00565 | Q9Z5Z2 | + | 126522 - 127244 | 27213.6 |
| 30s ribosomal protein s6--l-glutamate ligase | O1Q98_00570 | C6DEP6 | + | 127257 - 128159 | 32276.2 |
| ybjn domain-containing protein | O1Q98_00575 | P0AAY8 | + | 128252 - 128731 | 17400.8 |
| spermidine/putrescine abc transporter substrate-binding protein potf | O1Q98_00580 | P31133 | + | 129112 - 130221 | 40999.9 |
| putrescine abc transporter atp-binding subunit potg | O1Q98_00585 | P31134 | + | 130341 - 131474 | 41974.0 |
| putrescine abc transporter permease poth | O1Q98_00590 | P31135 | + | 131489 - 132448 | 35932.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
