Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | O1Q98_02975 | Q05526 | + | 660533 - 662164 | 62402.6 |
| sugar abc transporter permease | O1Q98_02980 | O31519 | + | 662211 - 663101 | 33357.1 |
| carbohydrate abc transporter permease | O1Q98_02985 | O31520 | + | 663094 - 663996 | 34213.4 |
| abc transporter atp-binding protein | O1Q98_02990 | P94360 | + | 664010 - 665137 | 42210.3 |
| abc transporter substrate-binding protein | O1Q98_02995 | O31518 | + | 665151 - 666443 | 48652.1 |
| porin | O1Q98_03000 | Q934G3 | + | 666697 - 667431 | 27757.5 |
| alpha/beta hydrolase | O1Q98_03005 | D5EV35 | + | 667917 - 668897 | 35400.1 |
| metal-dependent hydrolase | O1Q98_03010 | P64481 | + | 668978 - 669556 | 21643.9 |
| l-cystine transporter | O1Q98_03015 | P77529 | + | 669688 - 671079 | 48780.1 |
| ammonia-dependent nad(+) synthetase | O1Q98_03020 | C6DFZ6 | + | 671308 - 672132 | 30312.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
