Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts mannose transporter subunit iid | O1Q98_02925 | P69805 | + | 651894 - 652748 | 30973.4 |
| manganese efflux pump mntp | O1Q98_02930 | C6DG20 | + | 653265 - 653837 | 20424.8 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | O1Q98_02935 | P36999 | - | 653866 - 654699 | 30526.4 |
| transcription antiterminator/rna stability regulator cspe | O1Q98_02940 | P0A9Y8 | - | 654779 - 654988 | 7416.79 |
| duf2627 domain-containing protein | O1Q98_02945 | P64510 | - | 655028 - 655144 | 4135.62 |
| fructosamine kinase family protein | O1Q98_02950 | P58065 | + | 656158 - 657015 | 33059.1 |
| ynib family protein | O1Q98_02955 | Q56956 | - | 657054 - 657602 | 20819.0 |
| cupin domain-containing protein | O1Q98_02960 | Q05527 | - | 657817 - 658149 | 12368.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | O1Q98_02965 | Q05529 | + | 658470 - 659306 | 31459.3 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | O1Q98_02970 | Q05528 | + | 659498 - 660259 | 27360.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
