Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | O1Q98_02725 | Q7WZY4 | - | 608181 - 608822 | 23808.4 |
| pas domain s-box protein | O1Q98_02730 | A7X624 | - | 608856 - 610316 | 56360.1 |
| rna polymerase sigma factor | O1Q98_02735 | P37929 | - | 610607 - 611161 | 21453.6 |
| type iii secretion system gatekeeper subunit sctw | O1Q98_02740 | Q05395 | + | 611502 - 612668 | 42599.5 |
| type iii secretion system export apparatus subunit sctv | O1Q98_02745 | P35654 | + | 612672 - 614765 | 77183.6 |
| escd/yscd/hrpq family type iii secretion system inner membrane ring protein | O1Q98_02750 | Not Available | + | 614915 - 615859 | 34500.4 |
| is5 family transposase | O1Q98_02755 | Q8RK01 | + | 615859 - 617239 | 48732.9 |
| type iii secretion protein | O1Q98_02760 | Not Available | + | 617226 - 617705 | 18834.3 |
| type iii secretion system hrpp c-terminal domain-containing protein | O1Q98_02765 | Not Available | + | 617702 - 618220 | 18937.4 |
| type iii secretion system cytoplasmic ring protein sctq | O1Q98_02770 | O85093 | + | 618217 - 619344 | 40318.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
