Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein znua | O1Q98_02325 | Q8ZEU2 | - | 513785 - 514798 | 37243.2 |
| zinc abc transporter atp-binding protein znuc | O1Q98_02330 | Q6D4A8 | + | 514874 - 515632 | 27842.3 |
| is5 family transposase | O1Q98_02335 | P39832 | + | 515629 - 516415 | 29087.0 |
| holliday junction branch migration dna helicase ruvb | O1Q98_02340 | Q6D4A2 | - | 516472 - 517476 | 36931.8 |
| is5 family transposase | O1Q98_02345 | A8GFI8 | - | 517484 - 518102 | 21885.3 |
| hoxn/hupn/nixa family nickel/cobalt transporter | O1Q98_02350 | P23516 | - | 518341 - 519369 | 37245.2 |
| crossover junction endodeoxyribonuclease ruvc | O1Q98_02355 | B5XQ03 | - | 519620 - 520141 | 18687.7 |
| yebc/pmpr family dna-binding transcriptional regulator | O1Q98_02360 | C6DFE9 | - | 520182 - 520925 | 26336.9 |
| dihydroneopterin triphosphate diphosphatase | O1Q98_02365 | P0AFC1 | - | 521016 - 521450 | 16664.8 |
| is5 family transposase | O1Q98_02370 | C6DFE7 | - | 521452 - 523243 | 65915.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
