Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | O1Q98_01045 | Not Available | - | 240209 - 240535 | 12417.7 |
| pectate lyase | O1Q98_01050 | Q65EF5 | - | 240548 - 242233 | 53066.3 |
| type iii effector protein | O1Q98_01055 | Not Available | - | 242390 - 243379 | 29371.1 |
| avre-family type 3 secretion system effector | O1Q98_01060 | Not Available | + | 243604 - 245607 | 69816.5 |
| avre-family type 3 secretion system effector | O1Q98_01065 | Not Available | + | 245576 - 248635 | 108445.0 |
| type iii secretion system chaperone | O1Q98_01070 | Not Available | + | 248668 - 249090 | 15754.1 |
| isochorismatase family protein | O1Q98_01075 | G2X4M1 | - | 249111 - 249626 | 17814.2 |
| exodeoxyribonuclease v subunit gamma | O1Q98_01080 | P07648 | + | 249832 - 253320 | 131298.0 |
| hypothetical protein | O1Q98_01465 | Not Available | - | 316780 - 316992 | 7543.92 |
| hypothetical protein | O1Q98_01470 | Not Available | + | 317552 - 317893 | 12441.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
