Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | O1Q98_18635 | P17985 | - | 4100207 - 4101314 | 39498.1 |
| is5 family transposase | O1Q98_18640 | Not Available | - | 4101445 - 4101528 | 3171.85 |
| vpa1262 family protein | O1Q98_18645 | Not Available | - | 4101867 - 4105256 | 129595.0 |
| hypothetical protein | O1Q98_18650 | Not Available | - | 4105545 - 4106270 | 27658.5 |
| nacht domain-containing protein | O1Q98_18655 | Not Available | - | 4106212 - 4112490 | 238019.0 |
| is5 family transposase | O1Q98_18660 | P50358 | + | 4112721 - 4113565 | 31914.0 |
| zincin-like metallopeptidase domain-containing protein | O1Q98_18665 | P55426 | + | 4113879 - 4114823 | 34590.7 |
| type ii toxin-antitoxin system ccda family antitoxin | O1Q98_18670 | P62553 | + | 4115142 - 4115378 | 8999.49 |
| ccdb family protein | O1Q98_18675 | Q52042 | + | 4115381 - 4115695 | 11564.2 |
| hypothetical protein | O1Q98_18680 | Not Available | + | 4116106 - 4116816 | 26876.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
