Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system transcriptional repressor | O1Q98_17590 | P0A9I3 | - | 3896823 - 3897428 | 22191.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | O1Q98_17595 | Q5PLS1 | + | 3897540 - 3898418 | 31144.8 |
| outer membrane protein assembly factor bamc | O1Q98_17600 | Q0WCK7 | + | 3898435 - 3899475 | 37543.3 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | O1Q98_17605 | C6DBS2 | + | 3899625 - 3900338 | 26784.4 |
| duf441 domain-containing protein | O1Q98_17610 | C6CQK7 | + | 3900674 - 3901126 | 15465.9 |
| is5 family transposase | O1Q98_17615 | Q6D7Q9 | + | 3901147 - 3903176 | 74115.6 |
| esterase | O1Q98_17620 | P76561 | + | 3903406 - 3904092 | 25464.3 |
| ypfn family protein | O1Q98_17625 | A7FG55 | - | 3904168 - 3904356 | 7409.01 |
| m15 family metallopeptidase | O1Q98_17630 | P43941 | - | 3904391 - 3905077 | 25590.2 |
| succinyl-diaminopimelate desuccinylase | O1Q98_17635 | Q6D7N4 | - | 3905074 - 3906201 | 41090.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
