Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acireductone synthase | O1Q98_15960 | C6DCZ3 | + | 3539798 - 3540508 | 26158.5 |
| acireductone dioxygenase | O1Q98_15965 | Q3ZV00 | + | 3540505 - 3541047 | 20127.5 |
| s-methyl-5-thioribose-1-phosphate isomerase | O1Q98_15970 | C6DCZ1 | - | 3541149 - 3542180 | 36625.0 |
| s-methyl-5-thioribose kinase | O1Q98_15975 | C6DCZ0 | + | 3542513 - 3543715 | 44521.2 |
| acyl-coa dehydrogenase fade | O1Q98_15980 | Q8ZBY6 | - | 3543868 - 3546324 | 89343.7 |
| d-sedoheptulose 7-phosphate isomerase | O1Q98_15985 | Q6D1H3 | + | 3546586 - 3547167 | 20620.5 |
| is5 family transposase | O1Q98_15990 | Q47147 | + | 3547225 - 3547994 | 28439.6 |
| peptidoglycan meso-diaminopimelic acid protein amidase | O1Q98_15995 | P0AAA0 | - | 3548032 - 3548787 | 28360.8 |
| dna polymerase iv | O1Q98_16000 | Q6D1H8 | + | 3549090 - 3550148 | 39861.3 |
| beta-ala-his dipeptidase | O1Q98_16005 | P15288 | - | 3550179 - 3551639 | 52832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
